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1

Exhaustion of Racing Sperm in Nature-Mimicking Microfluidic Channels During Sorting

Tasoglu, Savas, Safaee, Hooman, Zhang, Xiaohui, Kingsley, James L., Catalano, Paolo N., Gurkan, Umut Atakan, Nureddin, Aida, Kayaalp, Emre, Anchan, Raymond M., Maas, Richard L., Tüzel, Erkan, Demirci,

Journal:

Year:

2013

Language:

english

File:

PDF, 2.64 MB

english, 2013

2

Lensless imaging for simultaneous microfluidic sperm monitoring and sorting

Zhang, Xiaohui, Khimji, Imran, Gurkan, Umut Atakan, Safaee, Hooman, Catalano, Paolo Nicolas, Keles, Hasan Onur, Kayaalp, Emre, Demirci, Utkan

Journal:

Year:

2011

Language:

english

File:

PDF, 231 KB

english, 2011

3

Use of commercial off-the-shelf digital cameras for scientific data acquisition and scene-specific color calibration

Akkaynak, Derya, Treibitz, Tali, Xiao, Bei, Gürkan, Umut A., Allen, Justine J., Demirci, Utkan, Hanlon, Roger T.

Journal:

Journal of the Optical Society of America A

Year:

2014

Language:

english

File:

PDF, 1.39 MB

english, 2014

4

Organismal engineering: Toward a robotic taxonomic key for devices using organic materials

Webster-Wood, Victoria A., Akkus, Ozan, Gurkan, Umut A., Chiel, Hillel J., Quinn, Roger D.

Journal:

Science Robotics

Year:

2017

Language:

english

File:

PDF, 1.06 MB

english, 2017

5

Shear dependent red blood cell adhesion in microscale flow

Kucukal, Erdem, Little, Jane A, Gurkan, Umut A.

Journal:

Integrative Biology

Year:

2018

Language:

english

File:

PDF, 2.31 MB

english, 2018

6

Efficient on-chip isolation of HIV subtypes

Wang, ShuQi, Esfahani, Matin, Gurkan, Umut A., Inci, Fatih, Kuritzkes, Daniel R., Demirci, Utkan

Journal:

Year:

2012

Language:

english

File:

PDF, 696 KB

english, 2012

7

CT-guided cutting needle lung biopsy using modified coaxial technique: Factors effecting risk of complications

Erkan Yildirim, Ismail Kirbas, Ali Harman, Umut Ozyer, H. Gurkan Tore, Cuneyt Aytekin, Fatih Boyvat

Journal:

European Journal of Radiology

Year:

2009

Language:

english

File:

PDF, 135 KB

english, 2009

8

Manipulating biological agents and cells in micro-scale volumes for applications in medicine

Tasoglu, Savas, Gurkan, Umut Atakan, Wang, ShuQi, Demirci, Utkan

Journal:

Chemical Society Reviews

Year:

2013

Language:

english

File:

PDF, 5.17 MB

english, 2013

9

Engineering Anisotropic Biomimetic Fibrocartilage Microenvironment by Bioprinting Mesenchymal Stem Cells in Nanoliter Gel Droplets

Gurkan, Umut A., El Assal, Rami, Yildiz, Simin E., Sung, Yuree, Trachtenberg, Alexander J., Kuo, Winston P., Demirci, Utkan

Journal:

Molecular Pharmaceutics

Year:

2014

Language:

english

File:

PDF, 4.74 MB

english, 2014

10

Microfluidic Sorting: Exhaustion of Racing Sperm in Nature-Mimicking Microfluidic Channels During Sorting (Small 20/2013)

Tasoglu, Savas, Safaee, Hooman, Zhang, Xiaohui, Kingsley, James L., Catalano, Paolo N., Gurkan, Umut Atakan, Nureddin, Aida, Kayaalp, Emre, Anchan, Raymond M., Maas, Richard L., Tüzel, Erkan, Demirci,

Journal:

Year:

2013

File:

PDF, 1.87 MB

2013

11

Paper and Flexible Substrates as Materials for Biosensing Platforms to Detect Multiple Biotargets

Shafiee, Hadi, Asghar, Waseem, Inci, Fatih, Yuksekkaya, Mehmet, Jahangir, Muntasir, Zhang, Michael H., Durmus, Naside Gozde, Gurkan, Umut Atakan, Kuritzkes, Daniel R., Demirci, Utkan

Journal:

Scientific Reports

Year:

2015

Language:

english

File:

PDF, 1.08 MB

english, 2015

12

Paramagnetic Levitational Assembly of Hydrogels

Tasoglu, Savas, Kavaz, Doga, Gurkan, Umut Atakan, Guven, Sinan, Chen, Pu, Zheng, Reila, Demirci, Utkan

Journal:

Advanced Materials

Year:

2013

Language:

english

File:

PDF, 1.39 MB

english, 2013

13

Microfluidic processing of synovial fluid for cytological analysis

Krebs, John C., Alapan, Yunus, Dennstedt, Barbara A., Wera, Glenn D., Gurkan, Umut A.

Journal:

Biomedical Microdevices

Year:

2017

Language:

english

File:

PDF, 1.94 MB

english, 2017

14

A monolithic Lagrangian meshfree scheme for Fluid-Structure Interaction problems within the OTM framework

Fan, Jiang, Liao, Huming, Ke, Renjie, Kucukal, Erdem, Gurkan, Umut A., Shen, Xiuli, Lu, Jian, Li, Bo

Journal:

Computer Methods in Applied Mechanics and Engineering

Year:

2018

Language:

english

File:

PDF, 6.34 MB

english, 2018

15

Standardized microfluidic assessment of red blood cell mediated microcapillary occlusion: association with clinical phenotype and hydroxyurea responsiveness in sickle cell disease

Man, Yuncheng, Kucukal, Erdem, An, Ran, Bode, Allison, Little, Jane A., Gurkan, Umut A.

Journal:

Microcirculation

Year:

2020

File:

PDF, 16.24 MB

2020

16

Three-Dimensional Magnetic Assembly of Microscale Hydrogels

Feng Xu, Chung-an Max Wu, Venkatakrishnan Rengarajan, Thomas Dylan Finley, Hasan Onur Keles, Yuree Sung, Baoqiang Li, Umut Atakan Gurkan, Utkan Demirci

Journal:

Advanced Materials

Year:

2011

Language:

english

File:

PDF, 1.16 MB

english, 2011

17

Comparison of morphology, orientation, and migration of tendon derived fibroblasts and bone marrow stromal cells on electrochemically aligned collagen constructs

Umut Atakan Gurkan, Xingguo Cheng, Vipuil Kishore, Jorge Alfredo Uquillas, Ozan Akkus

Journal:

Journal of Biomedical Materials Research Part A

Year:

2010

Language:

english

File:

PDF, 954 KB

english, 2010

18

An electrochemical fabrication process for the assembly of anisotropically oriented collagen bundles

Xingguo Cheng, Umut A. Gurkan, Christopher J. Dehen, Michael P. Tate, Hugh W. Hillhouse, Garth J. Simpson, Ozan Akkus

Journal:

Year:

2008

Language:

english

File:

PDF, 3.47 MB

english, 2008

19

Comparative biological activities of a plaque-purified variant and a Turkish native isolate of SpliNPV-B against Spodoptera littoralis (Lepidoptera: Noctuidae)

Umut Toprak, Şerife Bayram, Oktay M Gürkan

Journal:

Pest Management Science

Year:

2006

Language:

english

File:

PDF, 127 KB

english, 2006

20

Impact of a Turkish isolate and a plaque-purified variant of SpliNPV-B on larval stage development of Spodoptera littoralis (Lepidoptera: Noctuidae) Boisd

Umut Toprak, M Oktay Gürkan, Şerife Bayram

Journal:

Pest Management Science

Year:

2007

Language:

english

File:

PDF, 116 KB

english, 2007

21

A Scaffold-Free Multicellular Three-Dimensional In Vitro Model of Osteogenesis

Umut A. Gurkan, Vipuil Kishore, Keith W. Condon, Teresita M. Bellido, Ozan Akkus

Journal:

Calcified Tissue International

Year:

2011

Language:

english

File:

PDF, 2.43 MB

english, 2011

22

The Mechanical Environment of Bone Marrow: A Review

Umut Atakan Gurkan, Ozan Akkus

Journal:

Annals of Biomedical Engineering

Year:

2008

Language:

english

File:

PDF, 451 KB

english, 2008

23

Chitotriosidase activity predicts endothelial dysfunction in type-2 diabetes mellitus

Alper Sonmez, Cem Haymana, Serkan Tapan, Umut Safer, Gurkan Celebi, Ozlem Ozturk, Halil Genc, Teoman Dogru, Ilker Tasci, Gokhan Erdem, Abdullah Taslipinar, Aydogan Aydogdu, Mahmut I. Yilmaz, Ismail Ku

Journal:

Endocrine (Springer)

Year:

2010

Language:

english

File:

PDF, 202 KB

english, 2010

24

Statistical Modeling of Single Target Cell Encapsulation

Moon, SangJun, Ceyhan, Elvan, Gurkan, Umut Atakan, Demirci, Utkan, Borlongan, Cesario V.

Journal:

Year:

2011

Language:

english

File:

PDF, 711 KB

english, 2011

25

Release of Magnetic Nanoparticles from Cell-Encapsulating Biodegradable Nanobiomaterials

Xu, Feng, Inci, Fatih, Mullick, Omer, Gurkan, Umut Atakan, Sung, Yuree, Kavaz, Doga, Li, Baoqiang, Denkbas, Emir Baki, Demirci, Utkan

Journal:

Year:

2012

Language:

english

File:

PDF, 1.85 MB

english, 2012

26

Prediction and control of number of cells in microdroplets by stochastic modeling

Ceyhan, Elvan, Xu, Feng, Gurkan, Umut Atakan, Emre, Ahmet Emrehan, Turali, Emine Sumeyra, El Assal, Rami, Acikgenc, Ali, Wu, Chung-an Max, Demirci, Utkan

Journal:

Year:

2012

Language:

english

File:

PDF, 1.42 MB

english, 2012

27

Controlled viable release of selectively captured label-free cells in microchannels

Gurkan, Umut Atakan, Anand, Tarini, Tas, Huseyin, Elkan, David, Akay, Altug, Keles, Hasan Onur, Demirci, Utkan

Journal:

Year:

2011

Language:

english

File:

PDF, 730 KB

english, 2011

28

Smart Interface Materials Integrated with Microfluidics for On-Demand Local Capture and Release of Cells

Umut Atakan Gurkan, Savas Tasoglu, Derya Akkaynak, Oguzhan Avci, Sebnem Unluisler, Serli Canikyan, Noah MacCallum, Utkan Demirci

Journal:

Advanced Healthcare Materials

Year:

2012

Language:

english

File:

PDF, 1.50 MB

english, 2012

29

Emerging Technologies for Assembly of Microscale Hydrogels

Umut Atakan Gurkan, Savas Tasoglu, Doga Kavaz, Melik C. Demirel, Utkan Demirci

Journal:

Advanced Healthcare Materials

Year:

2012

Language:

english

File:

PDF, 3.49 MB

english, 2012

30

Miniaturized lensless imaging systems for cell and microorganism visualization in point-of-care testing

Umut Atakan Gurkan, Sangjun Moon, Hikmet Geckil, Feng Xu, Shuqi Wang, Tian Jian Lu, Dr. Utkan Demirci

Journal:

Biotechnology Journal

Year:

2011

Language:

english

File:

PDF, 760 KB

english, 2011

31

Editorial: Scaffold-free cell-based approaches in biomedicine and biotechnology

Umut Atakan Gurkan, Feng Xu

Journal:

Biotechnology Journal

Year:

2011

Language:

english

File:

PDF, 273 KB

english, 2011

32

The assembly of cell-encapsulating microscale hydrogels using acoustic waves

Feng Xu, Thomas D. Finley, Muge Turkaydin, Yuree Sung, Umut A. Gurkan, Ahmet S. Yavuz, Rasim O. Guldiken, Utkan Demirci

Journal:

Year:

2011

Language:

english

File:

PDF, 2.61 MB

english, 2011

33

Adnexal fascioliasis masquerading as ovarian cancer

Gurkan Yazici, Umut Talat Dilek, Tuba Karabacak, Devrim Ertunc, Metin Korkmaz, Saffet Dilek

Journal:

Gynecologic Oncology

Year:

2005

Language:

english

File:

PDF, 156 KB

english, 2005

34

Immune and Inflammatory Pathways are Involved in Inherent Bone Marrow Ossification

Umut Atakan Gurkan PhD, Ryan Golden BS, Vipuil Kishore PhD, Catherine P. Riley MS, Jiri Adamec PhD, Ozan Akkus PhD

Journal:

Clinical Orthopaedics and Related Research®

Year:

2012

Language:

english

File:

PDF, 523 KB

english, 2012

35

Ossifying Bone Marrow Explant Culture as a Three-Dimensional Mechanoresponsive In Vitro Model of Osteogenesis

Gurkan, Umut Atakan, Krueger, Adam, Akkus, Ozan

Journal:

Tissue Engineering Part A

Year:

2011

Language:

english

File:

PDF, 862 KB

english, 2011

36

Microengineering methods for cell-based microarrays and high-throughput drug-screening applications

Xu, Feng, Wu, JinHui, Wang, ShuQi, Durmus, Naside Gozde, Gurkan, Umut Atakan, Demirci, Utkan

Journal:

Year:

2011

Language:

english

File:

PDF, 1.49 MB

english, 2011

37

Simple Precision Creation of Digitally Specified, Spatially Heterogeneous, Engineered Tissue Architectures

Gurkan, Umut Atakan, Fan, Yantao, Xu, Feng, Erkmen, Burcu, Urkac, Emel Sokullu, Parlakgul, Gunes, Bernstein, Jacob, Xing, Wangli, Boyden, Edward S., Demirci, Utkan

Journal:

Advanced Materials

Year:

2013

Language:

english

File:

PDF, 1.33 MB

english, 2013

38

Hydrogels: Paramagnetic Levitational Assembly of Hydrogels (Adv. Mater. 8/2013)

Tasoglu, Savas, Kavaz, Doga, Gurkan, Umut Atakan, Guven, Sinan, Chen, Pu, Zheng, Reila, Demirci, Utkan

Journal:

Advanced Materials

Year:

2013

File:

PDF, 2.09 MB

2013

39

Nanoplasmonic Quantitative Detection of Intact Viruses from Unprocessed Whole Blood

Inci, Fatih, Tokel, Onur, Wang, ShuQi, Gurkan, Umut Atakan, Tasoglu, Savas, Kuritzkes, Daniel R., Demirci, Utkan

Journal:

Year:

2013

Language:

english

File:

PDF, 709 KB

english, 2013

40

Identification and coordinated expression of perilipin genes in the biological cycle of sunn pest, Eurygaster maura (Hemiptera: Scutelleridae): Implications for lipolysis and lipogenesis

Toprak, Umut, Guz, Nurper, Gurkan, M. Oktay, Hegedus, Dwayne D.

Journal:

Comparative Biochemistry and Physiology Part B: Biochemistry and Molecular Biology

Year:

2014

Language:

english

File:

PDF, 1.42 MB

english, 2014

41

Identification of a putative antifreeze protein gene that is highly expressed during preparation for winter in the sunn pest, Eurygaster maura

Guz, Nurper, Toprak, Umut, Dageri, Asli, Oktay Gurkan, M., Denlinger, David L.

Journal:

Journal of Insect Physiology

Year:

2014

Language:

english

File:

PDF, 885 KB

english, 2014

42

Viral-enhancing activity of an optical brightener for Spodoptera littoralis (Lepidoptera: Noctuidae) nucleopolyhedrovirus

Toprak, Umut, Susurluk, Hilal, Oktay Gürkan, M.

Journal:

Biocontrol Science and Technology

Year:

2007

Language:

english

File:

PDF, 114 KB

english, 2007

43

Secondary malignancy after imatinib therapy: eight cases and review of the literature

Duman, Berna Bozkurt, Paydas, Semra, Disel, Umut, Besen, Ayberk, Gurkan, Emel

Journal:

Leukemia and Lymphoma

Year:

2012

Language:

english

File:

PDF, 162 KB

english, 2012

44

Bio-Inspired Cryo-Ink Preserves Red Blood Cell Phenotype and Function During Nanoliter Vitrification

El Assal, Rami, Guven, Sinan, Gurkan, Umut Atakan, Gozen, Irep, Shafiee, Hadi, Dalbeyler, Sedef, Abdalla, Noor, Thomas, Gawain, Fuld, Wendy, Illigens, Ben M. W., Estanislau, Jessica, Khoory, Joseph, K

Journal:

Advanced Materials

Year:

2014

Language:

english

File:

PDF, 1.02 MB

english, 2014

45

Micro-a-fluidics ELISA for Rapid CD4 Cell Count at the Point-of-Care

Wang, ShuQi, Tasoglu, Savas, Chen, Paul Z., Chen, Michael, Akbas, Ragip, Wach, Sonya, Ozdemir, Cenk Ibrahim, Gurkan, Umut Atakan, Giguel, Francoise F., Kuritzkes, Daniel R., Demirci, Utkan

Journal:

Scientific Reports

Year:

2014

Language:

english

File:

PDF, 1.31 MB

english, 2014

46

Systemic Side Effects of Antiviral Therapy in a Patient with Acute Retinal Necrosis

Guney, Esra, Sezgin Akcay, Betul Ilkay, Erdogan, Gurkan, Unlu, Cıhan, Bozkurt, Kansu, Onur, Umut

Journal:

Ocular Immunology & Inflammation

Year:

2014

Language:

english

File:

PDF, 136 KB

english, 2014

47

Embryonic stem cell bioprinting for uniform and controlled size embryoid body formation

Xu, Feng, Sridharan, BanuPriya, Wang, ShuQi, Gurkan, Umut Atakan, Syverud, Brian, Demirci, Utkan

Journal:

Biomicrofluidics

Year:

2011

Language:

english

File:

PDF, 1.64 MB

english, 2011

48

Transport of a soft cargo on a nanoscale ratchet

Sekeroglu, Koray, Gurkan, Umut A., Demirci, Utkan, Demirel, Melik C.

Journal:

Applied Physics Letters

Year:

2011

Language:

english

File:

PDF, 727 KB

english, 2011

49

The Sequential Production Profiles of Growth Factors and their Relations to Bone Volume in Ossifying Bone Marrow Explants

Gurkan, Umut Atakan, Gargac, Joshua, Akkus, Ozan

Journal:

Tissue Engineering Part A

Year:

2010

Language:

english

File:

PDF, 9.06 MB

english, 2010

50

Nanoliter droplet vitrification for oocyte cryopreservation

Zhang, Xiaohui, Khimji, Imran, Shao, Lei, Safaee, Hooman, Desai, Khanjan, Keles, Hasan Onur, Gurkan, Umut Atakan, Kayaalp, Emre, Nureddin, Aida, Anchan, Raymond M, Maas, Richard L, Demirci, Utkan

Journal:

Year:

2012

Language:

english

File:

PDF, 2.18 MB

english, 2012